基因體散彈槍定序的生物資訊工具很多,由於核酸定序的數據樣態隨著科技進步不斷改變,怎樣選擇這些生物資訊工具其實是個大問題。我們來試試這個CulebrONT,他可以用來運行各種的散彈槍定序組裝的生物資訊工具、修正(polishing)、甚至於(有必要的話)把序列圈起來等等,幫助你進行各種方案間的比較,讓使用者可以建構適合自己的理想工作流程,這篇是我們的安裝筆記。
CulebrONT發表原文出處
Category: blog
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CulebrONT安裝筆記
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我想讀碩博士,要不要先去找教授?
YES, I think you should reach out to professors before graduate school applications.
我建議你應該要!
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Genomic Informatics for Beginners #2
This is a summary of the lecture content for the ourse ‘Shotgun Sequencing – Principle and Experiments’ in IGB, NCHU. This course module is designed to enable students with basic computer skills to utilize some bioinformatics software to perform analysis of genomic data. The second part of this course will explore more in using shell scripts and also scripts using Python.
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Genomic Informatics for Beginners #1
Working with CLI – What you need to know
This is a summary of the lecture content for the course ‘Shotgun Sequencing – Principle and Experiments’ in IGB, NCHU. This course module is designed to enable students with preliminary computer skills to use some of the bioinformatics software to perform analysis of genomic data. This part of the course will be conducted in a computer classroom, where each of the students will use a computer classroom PC (Windows) or their own laptop to log into a Linux server and learn to operate the computer using the CLI (command line interface). The operating system installed on the server is ubuntu Linux. There are pre-existing accounts for all students on the server.
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